2018年发表论文

1. Xue Guo, Jiajie Feng, Zhou Shi, Xishu Zhou, Mengting Yuan, Xuanyu Tao, Lauren Hale, Tong Yuan, Jianjun Wang, Yujia Qin, Aifen Zhou, Ying Fu, Liyou Wu, Zhili He, Joy D. Van Nostrand, Daliang Ning, Xueduan Liu, Yiqi Luo, James M. Tiedje, Yunfeng Yang, Jizhong Zhou. 2018. Climate warming leads to divergent succession of grassland microbial communities. Nature Climate Change 8: 813 (DOI: 10.1038/s41558-018-0254-2).

2. Shanquan Wang, Lan Qiu, Xiaowei Liu, Guofang Xu, Michael Siegert, Qihong Lu, Philippe Juneau, Ling Yu, Dawei Liang, Zhili He, Rongliang Qiu. 2018. Electron transport chains in organohalide-respiring bacteria and bioremediation implications. Biotechnology Advances 36: 1194-1206 (DOI: 10.1016/j.biotechadv.2018.03.018).

3. Casey Chen, Chris Hemme, Joan Beleno, Zhou Jason Shi, Daliang Ning, Yujia Qin, Qichao Tu, Michael Jorgensen, Zhili He, Liyou Wu, Jizhong Zhou. 2018. Oral microbiota of periodontal health and disease and their changes after nonsurgical periodontal therapy. ISME Journal 12: 1210-1224 (DOI: 10.1038/s41396-017-0037-1).

4. Longfei Shu, Bojie Zhang, David C. Queller, Joan E. Strassmann. 2018. Burkholderia bacteria use chemotaxis to find social amoeba Dictyostelium discoideum hosts. ISME Journal 12: 1977-1993 (DOI: 10.1038/s41396-018-0147-4).

5. Mengting M Yuan, Jin Zhang, Kai Xue, Liyou Wu, Ye Deng, Jie Deng, Lauren Hale, Xishu Zhou, Zhili He, Yunfeng Yang, Joy D Van Nostrand, Edward A G Schuur, Konstantinos T Konstantinidis, Christopher R Penton, James R Cole, James M Tiedje, Yiqi Luo, Jizhong Zhou. 2018. Microbial functional diversity covaries with permafrost thaw-induced environmental heterogeneity in tundra soil. Global Change Biology 24: 297-307 (DOI: 10.1111/gcb.13820).

6. Longfei Shu, Debra A Brock, Katherine S Geist, Jacob W Miller, David C Queller, Joan E Strassmann, Susanne DiSalvo. 2018. Symbiont location, host fitness, and possible coadaptation in a symbiosis between social amoebae and bacteria. eLife 7: e42660 (DOI: 10.7554/eLife.42660).

7. Zhili He, Ping Zhang, Linwei Wu, Andrea M. Rocha, Qichao Tu, Zhou Shi, Bo Wu, Yujia Qin, Jianjun Wang, Qingyun Yan, Daniel Curtis, Daliang Ning, Joy D. Van Nostrand, Liyou Wu, Yunfeng Yang, Dwayne A. Elias, David B. Watson, Michael W. W. Adams, Matthew W. Fields, Eric J. Alm, Terry C. Hazen, Paul D. Adams, Adam P. Arkin, Jizhong Zhou. 2018. Microbial functional gene diversity predicts groundwater contamination and ecosystem functioning. mBio 9: e02435-17 (DOI: 10.1128/mBio.02435-17).

8. Michael D. Weiser, Sean T. Michaletz, Vanessa Buzzard, Ye Deng, Zhili He, Lina Shen, Brian J. Enquist, Robert B. Waide, Jizhong Zhou, Michael Kaspari . 2018. Toward a theory for diversity gradients: the abundance - adaptation hypothesis. Ecography 41: 255-264 (DOI: 10.1111/ecog.02314).

9. Shengjing Shi, Donald J. Herman, Zhili He, Jennifer Pett-Ridge, Liyou Wu, Jizhong Zhou, Mary K. Firestone. 2018. Plant roots alter microbial functional genes supporting root litter decomposition. Soil Biology & Biochemistry 127: 90-99 (DOI: 10.1016/j.soilbio.2018.09.013).

10. Zhaoyang Chai, Zhili He, Yunyan Deng, Yufeng Yang, Yingzhong Tang. 2018. Cultivation of seaweed Gracilaria lemaneiformis enhanced biodiversity in a eukaryotic plankton community as revealed via metagenomic analyses. Molecular Ecology 27: 1081-1093 (DOI: 10.1111/mec.14496).

11. Ye Deng, Daliang Ning, Yujia Qin, Kai Xue, Liyou Wu, Zhili He, Huaqun Yin, Yuting Liang, Vanessa Buzzard, Sean T. Michaletz, Jizhong Zhou. 2018. Spatial scaling of forest soil microbial communities across a temperature gradient. Environmental Microbiology 20: 3504-3513 (DOI: 10.1111/1462-2920.14303).

12. Xinghao Li, Yuhe Yu, Chang Li, Qingyun Yan. 2018. Comparative study on the gut microbiotas of four economically important Asian carp species. Science China-Life Sciences 61: 696-705 (DOI: 10.1007/s11427-016-9296-5).

13. Bo Wu, Feifei Liu, Michael D. Weiser, Daliang Ning, Jordan G. Okie, Lina Shen, Juan Li, Benli Chai, Ye Deng, Kai Feng, Liyou Wu, Shouwen Chen, Jizhong Zhou, Zhili He. 2018. Temperature determines the diversity and structure of N2O-reducing microbial assemblages. Functional Ecology 32: 1867-1878 (DOI: 10.1111/1365-2435.13091).

14. Kaihui Liu, Xiaowei Ding, Xiaofei Tang, Jianjun Wang, Wenjun Li, Qingyun Yan, Zhenghua Liu. 2018. Macro and microelements drive diversity and composition of prokaryotic and fungal communities in hypersaline sediments and saline-alkaline soils. Frontiers in Microbiology 9: 352 (DOI: 10.3389/fmicb.2018.00352).

15. Hao Yu, Ye Deng, Zhili He, Joy D Van Nostrand, Shang Wang, Decai Jin, Aijie Wang, Liyou Wu, Daohan Wang, Xin Tai, Jizhong Zhou. 2018. Elevated CO2 and warming altered grassland microbial communities in soil top-layers. Frontiers in Microbiology 9: 1790 (DOI: 10.3389/fmicb.2018.01790).

16. Xue Guo, Xishu Zhou, Lauren Hale, Mengting Yuan, Jiajie Feng, Daliang Ning, Zhou Shi, Yujia Qin, Feifei Liu, Liyou Wu, Zhili He, Joy D. Van Nostrand, Xueduan Liu, Yiqi Luo, James M. Tiedje, Jizhong Zhou. 2018. Taxonomic and functional responses of soil microbial communities to annual removal of aboveground plant biomass. Frontiers in Microbiology 9: 954 (DOI: 10.3389/fmicb.2018.00954).

17. Xian Sun, Yizhi Cui, Qing Wang, Shengquan Tang, Xin Cao, Hongtian Luo, Zhili He, Xiaonong Hu, Xiangping Nie, Yufeng Yang, Tong Wang. 2018. Proteogenomic Analyses Revealed Favorable Metabolism Pattern Alterations in Rotifer Brachionus plicatilis Fed with Selenium-rich Chlorella. Journal of Agricultural and Food Chemistry 66: 6699-6707 (DOI: 10.1021/acs.jafc.8b00139).

18. Hao Yu, Zhili He, Aijie Wang, Jianping Xie, Liyou Wu, Joy D. Van Nostrand, Decai Jin, Zhimin Shao, Christopher W. Schadt, Jizhong Zhou, Ye Deng. 2018. Divergent responses of forest soil microbial communities under elevated CO2 in different depths of upper layers. Applied and Environmental Microbiology 84: e01694-17 (DOI: 10.1128/AEM.01694-17).

19. Kaifeng Li, Dongbo Cai, Zhangqian Wang, Zhili He, Shouwen Chena. 2018. Development of an efficient genome editing tool in Bacillus licheniformis using CRISPR-Cas9 nickase. Applied and Environmental Microbiology 84: e02608-17 (DOI: 10.1128/AEM.02608-17).

20. Weijing Zhu, Cheng Wang, Jaclyn Hill, Yangyang He, Bangyi Tao, Zhihua Mao, Weixiang Wu. 2018. A missing link in the estuarine nitrogen cycle?: Coupled nitrification-denitrification mediated by suspended particulate matter. Scientific Reports 8: 2282 (DOI: 10.1038/s41598-018-20688-4).

21. Dongwei Hou, Zhijian Huang, Shenzheng Zeng, Jian Liu, Dongdong Wei, Xisha Deng, Shaoping Weng, Qingyun Yan, Jianguo He. 2018. Intestinal bacterial signatures of white feces syndrome in shrimp. Applied Microbiology and Biotechnology 102: 3701-3709 (DOI: 10.1007/s00253-018-8855-2).

22. Bichan Li, Dongbo Cai, Shiying Hu, Anting Zhu, Zhili He, Shouwen Chen. 2018. Enhanced synthesis of poly-gamma-glutamic acid by increasing the intracellular reactive oxygen species in the Bacillus licheniformis 1-pyrroline-5-carboxylate dehydrogenase gene ycgN deficient strain. Applied Microbiology and Biotechnology 102: 10127-10137 (DOI: 10.1007/s00253-018-9372-z).

23. Hui Li, Zhuwen Xu, Qingyun Yan, Shan Yang, Joy D. Van Nostrand, Zhirui Wang, Zhili He, Jizhong Zhou, Yong Jiang, Ye Deng. 2018. Soil microbial beta-diversity is linked with compositional variation in aboveground plant biomass in a semi-arid grassland. Plant and Soil 423: 465-480 (DOI: 10.1007/s11104-017-3524-2).

24. Longfei Shu, Jie Qiu, Katja Räsänen. 2018. De novo oviduct transcriptome of the moor frog Rana arvalis: a quest for maternal effect candidate genes. PeerJ 6: e5452 (DOI: 10.7717/peerj.5452).

25. Min Li, Jun Zhang, Bo Wu, Zhongliang Zhou, Yongdong Xu. 2018. Identifying Keystone Species in the Microbial Community Based on Cross- Sectional Data. Current Gene Therapy 18: 296-306 (DOI: 10.2174/1566523218666181008155734).

26. Fanshu Xiao, Yuhe Yu, Jinjin Li, Philippe Juneau, Qingyun Yan. 2018. Necessary Sequencing Depth and Clustering Method to Obtain Relatively Stable Diversity Patterns in Studying Fish Gut Microbiota. Current Microbiology 75: 1240-1246 (DOI: 10.1007/s00284-018-1516-y).

27. 饶刘瑜, 李学梅, 李星浩, 朱文根, 余育和, 颜庆云. 2018. 转基因鲤鱼与对照鲤肠道微生物群落差异研究. 水生生物学报 42: 349-355 (DOI: 10.7541/2018.044).

28. 顾航,肖凡书,贺志理,颜庆云. 2018. 湿地微生物介导的甲烷排放机制. 微生物学报 58: 618-632 (DOI: 10.13343/j.cnki.wsxb.20170537 ).

29. 杨雪琴,连英丽,颜庆云,贺志理. 2018. 滨海湿地生态系统微生物驱动的氮循环研究进展. 微生物学报 58: 633-648 (DOI: 10.13343/j.cnki.wsxb.20170538 ).