2021年发表论文

    1. Li Huabing, Zeng Jin*, Ren Lijuan, Yan Qingyun, Wu Qinglong L.*. Enhanced metabolic potentials and functional gene interactions of microbial stress responses to a 4,100-m elevational increase in freshwater lakes. Frontiers in Microbiology, 2021, 11: 595967.
    2. Ding Xiaowei, Liu kaihui*, Yan Qingyun, Liu Xingyu, Chen Ni, Wang Guoliang, He Shuai. Sugar and organic acid availability modulate soil diazotroph community assembly and species co-occurrence patterns on the Tibetan Plateau. Applied Microbiology and Biotechnology, 2021, 105: 8545-8560.
    3. Huang Zhijian#, Hou Dongwei#, Zhou Renjun, Zeng Shenzheng, Xing Chengguang, Wei Dongdong, Deng Xisha, Yu Lingfei, Wang Hao, Deng Zhixuan, Weng Shaoping, Ning Daliang, Xiao Chuanle, Yan Qingyun, Zhou Jizhong, He Zhili*, He Jianguo*. Environmental water and sediment microbial communities shape intestine microbiota for host health: the central dogma in an anthropogenic aquaculture ecosystem. Frontiers in Microbiology, 2021, 12: 772149.
    4. Fanshu Xiao, Lanjie Liao, Qiaoqing Xu, Zhili He, Tiaoyi Xiao, Jianjun Wang, Jie Huang, Yuhe Yu, Bo Wu and Qingyun Yan*. Environmental Microbiology. Host-microbiota interactions and responses to grass carp reovirus infection in Ctenopharyngodon idellus. 2021, 23(1), 431–447.
    5. Zhenzhen He, Luting Wang, Yuexian Ge, Siyi Zhang, Yuehui Tian, Xin Yang * and Longfei Shu**. 2021. Both viable and inactivated amoeba spores protect their intracellular bacteria from drinking water disinfection. Journal of Hazardous Materials (DOI:10.1016/j.jhazmat.2021.126006).
    6. Xiaoli Yu, Jiayin Zhou, Wen Song, Mengzhao Xu, Qiang He, Yisheng Peng, Yun Tian, Cheng Wang, Longfei Shu, Shanquan Wang, Qqingyun Yan, Jihua Liu, Qichao Tu and Zhili He*. 2021. SCycDB: A curated functional gene database for metagenomic profiling of sulphur cycling pathways. Molecular Ecology Resources (DOI: 10.1111/1755-0998.13306).
    7. Chao Jin, Lingan Zhao, Weigao Zhao, Luting Wang, Shishu Zhu, Zihan Xiao, Yijun Mo, Miaoyue Zhang, Longfei Shu* and Rongliang Qiu*. 2021. Transport and Retention of Free-Living Amoeba Spores in Porous Media: Effects of Operational Parameters and Extracellular Polymeric Substances. Environment Science & Technology (DOI: 10.1021/acs.est.1c00785)
    8. Pubo Chen, Jie Huang, Liuyu Rao, Wengen Zhu, Yuhe Yu, Fanshu Xiao, Xiaojuan Chen, Huang Yu, Yongjie Wu, Kui Xu, Xiafei Zheng, Ruiwen Hu, Zhili He, Qingyun Yan. 2021. Resistance and Resilience of Fish Gut Microbiota to Silver. mSystems. (DOI:10.1128/mSystems.00630-21)
    9.  Kui Xu, Zhou Li, Juneau Philippe, Fanshu Xiao, Yingli Lian, Wei Zhang, Longfei Shu, Haibo Jiang, Keke Zhang, Cheng Wang, Shanquan Wang, Qingyun Yan, and Zhili He*. 2021. Toxic and protective mechanisms of cyanobacterium Synechocystis sp. in response to titanium dioxide nanoparticles. Environmental Pollution (DOI:10.1016/j.envpol.2021.116508)
    10. Libin Zhao, Kui Xu, Juneau Philippe, Peihua Huang, Yingli Lian, Xiafei Zheng, Qiuping Zhong, Wei Zhang, Fanshu Xiao, Bo Wu, Qingyun Yan and Zhili He*. 2021. Light modulates the effect of antibiotic norfloxacin on photosynthetic processes of Microcystis aeruginosa. Aquatic Toxicology (DOI: 10.1016/j.aquatox.2021.105826).
    11. Longfei Shu, Zhenzhen He, Xiaotong Guan, Yang Xueqin, Yuehui Tian, Siyi Zhang, Chenyuan Wu, Zhili He, Qingyun Yan, Cheng Wang* and Yijing Shi*. 2021. A dormant amoeba species can selectively sense and predate on different soil bacteria. Functional Ecology (DOI: 10.1111/1365-2435.13824).
    12.  Zhiwei Liang, Wenwen Fang, Yukui Luo, Qihong Lu, Juneau Philippe, Zhili He, and Shanquan Wang*. 2021. Mechanistic insights into organic carbon-driven water blackening and odorization of urban rivers. Journal of Hazardous Materials(DOI: 10.1016/j.jhazmat.2020. 124663).
    13. Yijing Shi, Queller David C, Yuehui Tian, Siyi Zhang, Qingyun Yan, Zhili He, Zhenzhen He, Chenyuan Wu, Cheng Wang* and Longfei Shu*. 2021. The Ecology and Evolution of Amoeba-Bacterium Interactions. Applied Environmental Microbiology (DOI: 10.1128/AEM.01866-20).
    14. Bo Wu, Feifei  Liu, Wenwen Fang, Tony Yang,  Guanghao Chen, Zhili He* and Shanquan Wang. 2021. Microbial sulfur metabolism and environmental implications. Science of the Total Environment (DOI:10.1016/j.scitotenv.2021. 146085)
    15. Fanshu Xiao, Wenwen Zhu, Yuhe Yu, Zhili He, Bo Wu, Cheng Wang, Longfei Shu, Xinghao Li, Huaqun Yin, Jianjun Wang, Philippe Juneau, Xiafei Zheng, Yongjie Wu, Juan Li, Xiaojuan Chen, Dongwei Hou, Zhijian Huang, Jianguo He, Guohan Xu, Liwei Xie, Huang Jie*, Qingyun Yan*. 2021. Host development overwhelms environmental dispersal in governing the ecological succession of zebrafish gut microbiota. npj Biofilms and Microbiomes (DOI:10.1038 /s41522-020-00176-2).
    16. Rruiwen Hu, Haiming Zhao, Xihui Xu, Zhigang Wang, Keke Yu, Longfei Shu, Qingyun Yan, Bo Wu, Cehui Mo and Zhili He* and Cheng Wang. 2021. Bacteria-driven phthalic acid ester biodegradation: Current status and emerging opportunities. Environ Intl 154: 106560 (DOI: 10.1016/j.envint.2021.106560).

 

    1. Huang Yu, Xingyu Liu, Chao Yang, Yisheng Peng, Xiaoli Yu, Hang Gu, Xiafei Zheng, Cheng Wang, Fanshu Xiao, Longfei Shu, Zhili He, Bo Wu* and Qingyun Yan*. 2021. Co-symbiosis of arbuscular mycorrhizal fungi (AMF) and diazotrophs promote biological nitrogen fixation in mangrove ecosystems. Soil Biol Biochem (DOI: 10.1016/j. soilbio.2021.108382).
    2. Binhao Wang, Xiafei Zheng, Hangjun Zhang, Xiaoli Yu, Yingli Lian, Xueqin Yang,  Huang Yu, Ruiwen Hu, Zhili He, Fanshu Xiao* and Qingyun Yan*. 2021. Metagenomic insights into the effects of submerged plants on functional potential of microbial communities in wetland sediments. Marine Life Science Technology(DOI: 10.1007/s42995-021-00100-3).
    3. Yongyi Liang, Qihong Lu,  Zhiwei Liang, Xiaokun Liu, Wenwen Fang, Dawei Liang, Jialiang Kuang, Rongliang  Qiu, Zhili He and Shanquan Wang*. 2021. Substrate-dependent competition and cooperation relationships between Geobacter and Dehalococcoides for their organohalide respiration. ISME Commun (DOI: 10.1038/s43705-021-00025-z).
    4. Xiafei Zheng, Keke Zhang, Tony Yang, Zhili He, Longfei Shu, Fanshu Xiao, Yongjie Wu, Binhao Wang, Huang Yu and Qingyun Yan*. 2021. Sediment resuspension drives protist metacommunity structure and assembly in grass carp (Ctenopharyngodon idella) aquaculture ponds. Science of the Total Environment (DOI: 10.1016/j.scitotenv.2020.142840).
    5. Qihong Lu, Yongyi Liang, Wenwen Fang, Kelan Guan, Chenchen Huang, Zhiwei Liang, Xuemeng Qi, Yanhong Zeng, Xiaojun Luo, Bixian Mai, Zhili He and Shanquan Wang*. 2021. Spatial Distribution, Bioconversion and Ecological Risk of PCBs and PBDEs in the Surface Sediment of Contaminated Urban Rivers: A Nationwide Study. Environmental Science & Technology (DOI: 10.1021/acs.est.1c01095).
    6. Zhang Na, Juneau Philippe, Ruilin Huang, Zhili He, Sun Bo, Jizhong Zhou and Liang Yuting*. 2021. Coexistence between antibiotic resistance genes and metal resistance genes in manure-fertilized soils. Geoderma (DOI: 10.1016/j.geoderma. 2020.114760).
    7. Jiabao Li, Ting Xie, He Zhu, Jun Zhou, Chaonan Li, Wenjun Xiong, Lin Xu, Yanhong Wu, Zhili He and Xiangzhen Li*. 2021. Alkaline phosphatase activity mediates soil organic phosphorus mineralization in a subalpine forest ecosystem. Geoderma (DOI:10.1016/j.geoderma.2021.115376)
    8. Jiayin Zhou, Xiaoli Yu, Jihua Liu, Wei Qin, Zhili He, Stahl David, Nianzhi Jiao, Jizhong Zhou, Qichao Tu*. 2021. VB12Path for accurate metagenomic profiling of microbially driven cobalamin synthesis pathways. mSystems (DOI: 10.1128/mSystems.00497-21).
    9. Jiao Sun, Ziyu Lin, Daliang Ning*, Hui Wang, Zuotao Zhang, Zhili He and Jizhong Zhou . 2021. Functional microbial community structures and chemical properties indicated mechanisms and potential risks of urban river eco- remediation. Science of the Total Environment (DOI:10.1016/j.scitotenv.2021. 149868).
    10. Yu H, Deng Y, He Z, Pendall E, Carrillo Y, Wang S, Jin D, Wu L, Wang A, Xu Y, Liu B, Tai X and Zhou J. Stimulation of soil microbial functioning by elevated CO2 may 1 surpass effects mediated by irrigation in a semiarid grassland. Geoderma (DOI: 10.1016/j.geoderma.2021.115162).
    11.  Binhao Wang, Stirling Erinne, Zhili He, Bin Ma, Hangjun Zhang, Xiafei Zheng, Fanshu Xiao and Qingyun Yan. Pollution alters methanogenic and methanotrophic communities and increases dissolved methane in small ponds. Science of the Total Environment (DOI: 10.1016/j.scitotenv.2021.149723).
    12. Enze Li, Tongchu Deng, Lei Yan, Jizhong Zhou, Zhili He, Ye Deng and Meiying Xu. 2021. Elevated nitrate simplifies microbial community compositions and interactions in sulfide-rich river sediments. Science of the Total Environment (DOI: 10.1016/j.scitotenv.2020.141513).
    13. Qian Youfen, Meiying Xu, Tong chu Deng, Wenzhe Hu, Zhili He, Xunan Yang, Bin Wang, Da Song, Letian Chen, Youda Huang and Guoping Sun. 2021. Synergistic interactions of Desulfovibrio and Petrimonas for sulfate-reduction coupling polycyclic aromatic hydrocarbon degradation. Journal of Hazardous Materials(DOI: 10.1016/j.jhazmat.2020.124385).
    14. Huang Yu, Xiafei Zheng, Wanlin Weng, Xizhe Yan, Pubo Chen, Xingyu Liu, Tao Peng, Qiuping Zhong, Kui Xu, Cheng Wang, Longfei Shu, Tony Yang, Fanshu Xiao, Zhili He, Qingyun Yan. 2021. Synergistic effects of antimony and arsenic contaminations on bacterial, archaeal and fungal communities in the rhizosphere of Miscanthus sinensis: insights for nitrification and carbon mineralization. Journal of Hazardous Materials(DOI: 10.1016/j.jhazmat. 2021.125094).
    15. Mingyue Li, Anqi Fang, Xiaoli Yu, Keke Zhang, Zhili He, Cheng Wang, Yisheng Peng, Fanshu Xiao, Tony Yang, Wei Zhang, Xiafei Zheng, Qiuping Zhong, Xingyu Liu, Qingyun Yan. 2021. Microbially-driven sulfur cycling microbial communities in different mangrove sediments. Chemosphere(DOI:10.1016 /j.chemosphere.2020.128597).
    16. Mingyue Li, Jiachao Zhang, Xiao Yang, Yaoyu Zhou, Lihua Zhang, Yuan Yang, Lin Luo, Qingyun Yan. 2021. Responses of ammonia-oxidizing microorganisms to biochar and compost amendments of heavy metals-polluted soil. Journal of Environmental Sciences(DOI: 10.1016/j.jes.2020.09.029).
    17. Qihong Lu, Jinting Liu, Haozheng He, Zhiwei Liang, Rongliang Qiu and Shanquan Wang. 2021. Waste activated sludge stimulates in situ microbial reductive dehalogenation of organohalide-contaminated soil. Journal of  Hazardous Materials (DOI：10.1016/j.jhazmat.2021.125189).
    18. Rui Shen, Ling Yu, Pan Xu, Zhiwei Liang, Qihong Lu, Dawei Liang, Zhili He, Shanquan Wang. Water content as a primary parameter determines microbial reductive dechlorination activities in soil. Chemosphere (DOI:10.1016/j. chemosphere.2020.129152）. 
    19.  Zhiwei Liang, Guofang Xu, Jiangjian Shi, Sining Yu, Qihong Lu, Dawei Liang, Lianpeng Sun, Shanquan Wang. 2021. Sludge digestibility and functionally active microorganisms in methanogenic sludge digesters revealed by E. coli-fed digestion and microbial source tracking. Environmental Research (DOI: 10.1016/j.envres.2020.110539).
    20. Cheng Wang, Ruiwen Hu, Strong P.J., Wei Zhuang, Weiming Huang, Zhiwen Luo, Qingyun Yan, Zhili He and Longfei Shu*. 2021. Prevalence of Antibiotic Resistance Genes and Bacterial Pathogens along the Soil–Mangrove Root Continuum. Journal of Hazardous Materials (Doi:10.1016/j.jhazmat.2020.1 24985)
    21. Zhiwen Luo, Qiuping Zhong, Xingguo Han, Ruiwen Hu, Xingyu Liu, Wenjun Xu, Yongjie Wu, Weiming Huang, Zhengyuan Zhou, Wei Zhuang, Qingyun Yan, Zhili He, Cheng Wang*. 2021. Depth-dependent variability of biological nitrogen fixation and diazotrophic communities in mangrove sediments. Microbiome
    22. Zhengyuan Zhou, Ruiwen Hu, Yanmei Ni, Wei Zhuang, Zhiwen Luo, Weiming Huang, Qingyun Yan, Zhili He, Qiuping Zhong, Cheng Wang*. 2021.Genetic elucidation of quorum sensing and cobamide biosynthesis in divergent bacterial-fungal associations across the soil-mangrove root interface. Frontiers in Microbiology
    23. 焦念志，刘纪化, 石拓, 张传伦, 张永雨, 郑强, 陈泉睿, 汤凯, 王誉泽, 董海良, 唐剑武, 叶思源, 董双林, 高坤山, 张继红, 薛强, 李琦, 贺志理, 屠奇超, 王法明, 黄小平, 白雁, 潘德炉. 2021. 实施海洋负排放践行碳中和战略. 中国科学: 地球科学 51: 1–14(DOI: 10.1360/SSTe-2020-0358).
    24. 杨宇峰，罗洪添，王庆，贺志理，龙爱民. 2021.大型海藻规模栽培是增加海洋碳汇和解决近海环境问题的有效方法. 中国科学院院刊 36: 259-269 (DOI：10.16418/j.issn.1000-3045.20210217103).